💰 Key Takeaway: Japan taxes property in five phases — acquisition, holding, rental income, sale, and inheritance. Rates are nationality-blind: a foreign owner pays exactly what a Japanese owner pays. The traps are structural, not discriminatory — the biggest ones are the demolition trap (clearing a building can raise land tax up to ~6x) and the 5-year capital-gains boundary counted from January 1, not your purchase date.
Most guides treat "Japan property tax" as a single annual bill. It isn't. Japanese real estate is taxed at every stage of ownership, and the tax that surprises foreign owners is rarely the annual one — it's the acquisition tax that lands 3–6 months after closing, the 20.42% that a property manager withholds from rent, or the 39.63% short-term capital-gains rate that applies because they miscounted the five-year clock.
This article maps the entire tax lifecycle so you can budget for all of it up front. For the ongoing, month-to-month cost picture (management fees, repair reserves, insurance) alongside the annual tax, see our companion Japan property running costs guide — we link it for context rather than repeating its tables here.
📋 A note on figures: Every rate below is attributed to its official source (National Tax Agency / 国税庁, Ministry of Internal Affairs and Communications / 総務省, or Ministry of Finance / 財務省). Reduced rates are time-limited and extended periodically — verify the current reduction period for your purchase year. This is general information, not individual tax advice.
The 3-Phase Tax Map
Every tax a foreign owner encounters, organized by when it hits:
| Phase | Tax (JP name) | Who levies it | Headline rate |
|---|---|---|---|
| Acquisition | Real estate acquisition tax (不動産取得税) | Prefecture | 3% residential / 4% standard |
| Acquisition | Registration & license tax (登録免許税) | National (NTA) | 1.5–2.0% of assessed value |
| Acquisition | Stamp duty (印紙税) | National (MOF) | Fixed by contract band |
| Holding | Fixed asset tax (固定資産税) | Municipality | 1.4% of assessed value |
| Holding | City planning tax (都市計画税) | Municipality | up to 0.3% of assessed value |
| Rental income | Income tax + withholding (所得税) | National (NTA) | 20.42% withholding (non-residents) |
| Sale | Capital gains tax (譲渡所得税) | National + local | 20.315% long / 39.63% short |
| Sale | Buyer withholding on non-resident sellers | National (NTA) | 10.21% of price |
| Inheritance / gift | Inheritance & gift tax (相続税・贈与税) | National (NTA) | Progressive, situs-based |
The rest of this guide works through each phase in order.
Phase 1 — Acquisition Taxes
These are one-time taxes triggered by buying. Budget for them in addition to agent commission and legal fees — for the non-tax side of closing costs, see our Japan property buying costs breakdown.
Real Estate Acquisition Tax (不動産取得税)
A one-time prefectural tax, billed 3–6 months after registration — long enough that many buyers have forgotten to reserve for it.
- Standard rate: 4% of the assessed value (固定資産税評価額).
- Reduced to 3% for land and residential buildings — a temporary measure that has been repeatedly extended (currently through March 31, 2027; verify at write time). Non-residential buildings remain at 4%.
- Land additionally gets a 1/2 valuation reduction over the same period.
- Qualifying residential purchases receive fixed deductions (a standard ¥12M deduction for homes meeting current earthquake standards, and a corresponding land credit) that frequently reduce the residential building portion to near zero.
Source: Local Tax Act (地方税法); administered by prefectural tax offices under MIC oversight.
Registration & License Tax (登録免許税)
Paid to the national government when the judicial scrivener (司法書士) records the ownership transfer at the Legal Affairs Bureau:
| Registration | Standard | Reduced (housing, time-limited) |
|---|---|---|
| Land ownership transfer | 2.0% | 1.5% (verify current period) |
| Building transfer (used) | 2.0% | — |
| New building first registration | 0.4% | 0.15% (qualifying homes) |
| Mortgage lien registration | 0.4% | 0.1% (qualifying homes) |
The tax is charged on the assessed value (typically 50–70% of market price), so the effective cost against your purchase price is lower than the headline rate.
Source: Registration and License Tax Act (登録免許税法); National Tax Agency (国税庁).
Stamp Duty (印紙税)
A national tax on the purchase contract, set by price band (reduced rates currently apply through March 31, 2027; verify):
| Contract amount | Stamp duty (reduced) |
|---|---|
| ¥5M–¥10M | ¥5,000 |
| ¥10M–¥50M | ¥10,000 |
| ¥50M–¥100M | ¥30,000 |
| ¥100M–¥500M | ¥60,000 |
Source: Stamp Tax Act (印紙税法); Ministry of Finance (財務省) / NTA.
Phase 2 — Holding Taxes (Annual)
Two municipal taxes are billed together every year to whoever owns the property on January 1.
Fixed Asset Tax (固定資産税)
- Standard rate: 1.4% of the assessed value.
- The value is reassessed every 3 years by the municipality.
- New residential buildings get a 50% reduction for the first 3 years (5 years for fire-resistant mid/high-rise construction).
Source: administered by municipalities under the Local Tax Act; MIC oversight.
City Planning Tax (都市計画税)
- Maximum rate: 0.3% of assessed value (municipalities set their own rate up to this cap).
- Charged only in designated urbanization-promotion areas — many rural municipalities do not levy it at all.
Together these are the "1.4% + 0.3%" figure you'll see quoted — but that headline overstates what most owners actually pay, because of the exemption below.
The Residential Land Exemption (住宅用地特例)
This is the single most important reason Japanese property tax is low. Land under a home is assessed at a fraction of its value:
| Land under a residence | Fixed asset tax base | City planning tax base |
|---|---|---|
| Small-scale (portion up to 200㎡) | 1/6 | 1/3 |
| General (portion above 200㎡) | 1/3 | 2/3 |
So the effective land tax is dramatically lower than 1.4% — as long as a residence stands on the land. Which brings us to the trap.
⚠️ The Demolition Trap
If you demolish the building, the land loses the 住宅用地特例, and the fixed asset tax on that land can jump up to ~6x. The same thing happens if a neglected vacant house is designated a 特定空家 (specified vacant house) — the exemption is revoked even without demolition. This turns a ¥50,000/year bill into a ¥300,000/year bill for a property you may not even be able to use. If you're weighing an akiya where the structure is unsalvageable, model this before clearing the lot — our hidden costs of ¥0 akiya guide walks through the full demolition-and-holding math.
How the Tax Base Relates to Valuation
All of the above is calculated off the assessed value (固定資産税評価額), which is a government valuation distinct from — and usually well below — market price. It also differs from the rosenka (路線価) value used for inheritance tax; understanding which official value applies to which tax is covered in our rosenka vs market price guide.
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Phase 3 — Rental Income (Non-Residents)
If you rent the property out and live outside Japan, the income is taxed at source:
- 20.42% withholding on gross rent, remitted by the tenant or property manager. (Exception: an individual tenant renting the property as a home for themselves or a relative is not required to withhold.)
- You must appoint a tax agent (納税管理人) in Japan — usually your property manager or tax accountant — to handle filings.
- The 20.42% is a prepayment, not the final tax. By filing a return, you deduct depreciation, management fees, repairs, property tax, and insurance, and typically recover a large part of the withholding.
Short-term-rental (minpaku) owners have extra layers — consumption tax, depreciation schedules, and treaty benefits. Rather than repeat them here, see the dedicated Minpaku tax guide for non-resident owners.
Phase 4 — Sale (Capital Gains)
When you sell at a profit, the gain (譲渡所得) is taxed at a rate that depends on how long you held:
| Holding period | National (incl. 2.1% surtax) | Local | Total |
|---|---|---|---|
| Short-term (≤5 years) | 30.63% | 9% | 39.63% |
| Long-term (>5 years) | 15.315% | 5% | 20.315% |
Source: National Tax Agency (国税庁).
⏱️ The 5-year boundary is counted from January 1 — not your purchase date. "Long-term" requires that you owned the property for more than 5 years as of January 1 of the year you sell. In practice this means holding across six January 1sts: a property bought in mid-2026 only qualifies for the 20.315% rate if sold on or after January 1, 2032. Selling a few months early can nearly double your tax bill.
Note for non-residents: local inhabitant tax (住民税) is assessed on where you lived on January 1. Non-residents generally aren't subject to it, so their effective rate is often the national-only portion (15.315% long-term / 30.63% short-term) — confirm your position with a tax accountant.
The 10.21% Buyer-Withholding Rule
When you sell as a non-resident, the buyer is legally required to withhold 10.21% of the purchase price (not the gain) and remit it to the tax office. You then file a return to reconcile the actual tax and claim any refund.
The withholding is not required only when both conditions are met:
- the sale price is ¥100 million or less, and
- the buyer is an individual purchasing the property as a home for themselves or a relative.
For any investment-purpose sale, or any sale above ¥100M, expect the 10.21% to be withheld at closing.
Phase 5 — Inheritance & Gift Tax
Japanese inheritance tax (相続税) and gift tax (贈与税) apply to Japan-located property, regardless of the nationality or residence of the deceased owner or the heirs — real estate situated in Japan is always within scope. The taxable value of land is based on the rosenka (路線価), which is why that figure matters for succession planning; see our Japan rosenka guide for how it's set and how far it can sit below market value.
Two Worked Examples
These examples are hypothetical and simplified for illustration. Assessed values, deductions, and city-planning-tax applicability vary by property and municipality. They exclude non-tax costs (agent commission, scrivener fees). Use them to see the shape of the tax burden, not as a quote.
Example A — ¥30M Tokyo Condo
Assumptions: assessed value ¥18M (land ¥8M / building ¥10M); small-scale residential land; city planning tax applies.
At purchase (one-time taxes):
| Tax | Rough amount |
|---|---|
| Registration & license (land 1.5% + building 2.0%) | ~¥320,000 |
| Real estate acquisition tax (after residential reductions) | ~¥100,000 |
| Stamp duty | ¥10,000 |
| Total at purchase | ~¥430,000 (≈1.4% of price) |
Per year (holding taxes):
| Tax | Calculation | Amount |
|---|---|---|
| Fixed asset — land | ¥8M × 1/6 × 1.4% | ~¥18,700 |
| Fixed asset — building | ¥10M × 1.4% | ~¥140,000 |
| City planning — land | ¥8M × 1/3 × 0.3% | ~¥8,000 |
| City planning — building | ¥10M × 0.3% | ~¥30,000 |
| Annual total | ~¥197,000/year |
At sale (hypothetically for ¥36M after 6+ January 1sts, ~¥3M taxable gain): long-term capital gains ≈ ¥609,000 (20.315%). As a non-resident seller, the buyer withholds 10.21% of ¥36M ≈ ¥3.68M at closing, reconciled when you file.
Example B — ¥15M Regional House
Assumptions: assessed value ¥6M (land ¥2M / building ¥4M); small-scale residential land; no city planning tax (common in rural municipalities).
At purchase: registration & license ~¥110,000 + acquisition tax ~¥30,000 + stamp ¥10,000 = ~¥150,000 (≈1% of price).
Per year: fixed asset tax ≈ (¥2M × 1/6 × 1.4%) + (¥4M × 1.4%) ≈ ~¥61,000/year.
At sale: regional houses often sell flat or at a loss, so capital gains tax is frequently ¥0 — but watch the demolition trap: if you clear the structure, the land loses its 1/6 exemption and annual tax can jump toward ~¥170,000.
When a Corporate Structure (GK/KK) Changes the Math
Some investors hold through a Japanese company (合同会社 GK or 株式会社 KK). It rarely pays for a single home — annual maintenance runs roughly ¥1,000,000–1,200,000 (a ~¥70,000 inhabitant tax applies even at zero profit) — but it can help when you hold 3+ properties, earn >¥5M/year in rent, or plan a short-term flip (corporate tax ~30% can beat the 39.63% individual short-term rate). Always confirm with a licensed tax accountant (税理士) before incorporating.
Frequently Asked Questions
How much is property tax in Japan?
Annual property tax is fixed asset tax at 1.4% + city planning tax up to 0.3% of the government-assessed value — but the effective bill is much lower because land under a home is assessed at just 1/6 (small-scale) of its value. A typical Tokyo condo runs roughly ¥150,000–250,000/year; a small regional house often ¥40,000–80,000/year. On top of that annual tax, you also pay one-time acquisition taxes (~3–4%) when you buy and capital gains tax when you sell at a profit.
Do foreigners pay higher property tax in Japan?
No. Japan's property taxes are nationality-blind — a foreign owner pays exactly the same rates as a Japanese owner at every phase (acquisition, holding, sale, inheritance). Unlike Canada, Australia, or Singapore, Japan imposes no foreign-buyer surcharge. The only residency-linked differences are procedural: non-residents have rental income withheld at 20.42%, must appoint a tax agent (納税管理人), and have 10.21% withheld by the buyer when they sell.
Is there annual property tax in Japan?
Yes. Fixed asset tax (固定資産税) and, in urban areas, city planning tax (都市計画税) are billed every year to whoever owns the property on January 1. They are separate from the one-time taxes you pay at purchase and sale.
What is the "1.4% + 0.3%" I keep seeing?
That's the fixed asset tax (1.4%) plus the maximum city planning tax (0.3%) — the two annual holding taxes, quoted at their headline rates. Your real bill is lower because of the residential land exemption (1/6 or 1/3 of assessed value) and because many rural areas don't charge the 0.3% city planning tax at all.
Does removing an old building really raise my tax?
Yes — this is the demolition trap. Land under a residence is taxed on 1/6 of its value; demolish the building (or let it be designated a 特定空家) and that exemption disappears, so the land's fixed asset tax can rise up to ~6x. Model this before clearing any lot — see our akiya hidden-costs guide.
Related Articles
- Japan Property Running Costs: Monthly & Annual Ownership Costs →
- Japan Fixed Asset Tax (固定資産税) Explained for Foreign Owners →
- Minpaku Tax Guide for Non-Resident Owners →
- The Hidden Costs of ¥0 Akiya (Demolition & Holding) →
- Japan Rosenka 2026: Official Tax Land Values →
- Rosenka vs Market Price: Why the Tax Value Can Be 10x Off →
- Japan Property Buying Costs: Complete Fee Breakdown →
Disclaimer
This guide provides general information and is not tax advice. Tax rates, reductions, and reduction periods change frequently, and individual circumstances vary significantly. Figures attributed to the National Tax Agency (国税庁), Ministry of Internal Affairs and Communications (総務省), and Ministry of Finance (財務省) reflect general rules and should be re-verified at the time of your transaction. For advice on your specific situation, a licensed tax accountant (税理士) is legally required — neither this article nor JRE can provide individual tax advice.
